Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn1Q8K0T0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rtn1Q8K0T0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Gm13884-201ENSMUST00000118103 829 ntBASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Gm6089-201ENSMUST00000197666 938 ntBASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtn1Q8K0T0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtn1Q8K0T0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Gm27741-201ENSMUST00000185060 237 ntBASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtn1Q8K0T0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.92■□□□□ 0.46
Rtn1Q8K0T0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms