Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gm25406-201ENSMUST00000157599 105 ntBASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Hmgcs1Q8JZK9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.86□□□□□ -0.03
Hmgcs1Q8JZK9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmgcs1Q8JZK9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms