Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.65□□□□□ -0.06
Rfwd3Q8CIK8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.07
Rfwd3Q8CIK8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm8825-201ENSMUST00000182565 998 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm4518-201ENSMUST00000182638 718 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.64□□□□□ -0.07
Rfwd3Q8CIK8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Gm27741-201ENSMUST00000185060 237 ntBASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Gm8655-201ENSMUST00000221159 852 ntBASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rfwd3Q8CIK8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms