Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.71■□□□□ 0.11
Clip4Q8CI96 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
Clip4Q8CI96 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Clip4Q8CI96 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.7■□□□□ 0.1
Clip4Q8CI96 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Clip4Q8CI96 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.69■□□□□ 0.1
Clip4Q8CI96 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.69■□□□□ 0.1
Clip4Q8CI96 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Clip4Q8CI96 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm24589-201ENSMUST00000116692 94 ntBASIC15.68■□□□□ 0.1
Clip4Q8CI96 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm44454-201ENSMUST00000198541 138 ntBASIC15.68■□□□□ 0.1
Clip4Q8CI96 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm34391-201ENSMUST00000203706 907 ntBASIC15.68■□□□□ 0.1
Clip4Q8CI96 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Birc2-201ENSMUST00000054878 378 ntBASIC15.68■□□□□ 0.1
Clip4Q8CI96 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Clip4Q8CI96 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.67■□□□□ 0.1
Clip4Q8CI96 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.67■□□□□ 0.1
Clip4Q8CI96 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms