Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rab11fip3Q8CHD8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Gm13597-201ENSMUST00000121239 375 ntBASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Gm14822-201ENSMUST00000122247 291 ntBASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Gm27301-201ENSMUST00000184012 127 ntBASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip3Q8CHD8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm23935-201ENSMUST00000102303 57 ntBASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm24270-201ENSMUST00000102326 57 ntBASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm24245-201ENSMUST00000157318 57 ntBASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Rab11fip3Q8CHD8 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.08■□□□□ 0.8
Rab11fip3Q8CHD8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.08■□□□□ 0.8
Rab11fip3Q8CHD8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip3Q8CHD8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip3Q8CHD8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip3Q8CHD8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Gm44492-201ENSMUST00000197012 141 ntBASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip3Q8CHD8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip3Q8CHD8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip3Q8CHD8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms