Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Mir3113-201ENSMUST00000175478 76 ntBASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rdh1Q8CGV4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rdh1Q8CGV4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rdh1Q8CGV4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Gm10175-201ENSMUST00000086013 645 ntBASIC15.08■□□□□ 0
Rdh1Q8CGV4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rdh1Q8CGV4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm13597-201ENSMUST00000121239 375 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm8318-201ENSMUST00000182954 872 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm27702-201ENSMUST00000184512 56 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Mir8117-201ENSMUST00000184773 107 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms