Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ShfQ8CG80 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ShfQ8CG80 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm8825-201ENSMUST00000182565 998 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm4518-201ENSMUST00000182638 718 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.88□□□□□ -0.19
ShfQ8CG80 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.88□□□□□ -0.19
ShfQ8CG80 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ShfQ8CG80 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Rprl3-201ENSMUST00000157400 290 ntBASIC13.87□□□□□ -0.19
ShfQ8CG80 Gm25016-201ENSMUST00000158399 131 ntBASIC13.87□□□□□ -0.19
ShfQ8CG80 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.87□□□□□ -0.19
ShfQ8CG80 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.87□□□□□ -0.19
ShfQ8CG80 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ShfQ8CG80 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ShfQ8CG80 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.86□□□□□ -0.19
ShfQ8CG80 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.86□□□□□ -0.19
ShfQ8CG80 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ShfQ8CG80 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms