Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.26■□□□□ 0.67
Smc5Q8CG46 AC160980.1-201ENSMUST00000224136 970 ntBASIC19.26■□□□□ 0.67
Smc5Q8CG46 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.26■□□□□ 0.67
Smc5Q8CG46 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smc5Q8CG46 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.25■□□□□ 0.67
Smc5Q8CG46 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.25■□□□□ 0.67
Smc5Q8CG46 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.25■□□□□ 0.67
Smc5Q8CG46 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.25■□□□□ 0.67
Smc5Q8CG46 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smc5Q8CG46 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.24■□□□□ 0.67
Smc5Q8CG46 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.24■□□□□ 0.67
Smc5Q8CG46 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smc5Q8CG46 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.23■□□□□ 0.67
Smc5Q8CG46 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.23■□□□□ 0.67
Smc5Q8CG46 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smc5Q8CG46 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.22■□□□□ 0.67
Smc5Q8CG46 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smc5Q8CG46 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms