Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rsph6aQ8CDR2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rsph6aQ8CDR2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rsph6aQ8CDR2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rsph6aQ8CDR2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rsph6aQ8CDR2 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Gm12008-201ENSMUST00000117791 755 ntBASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Gm27301-201ENSMUST00000184012 127 ntBASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Gm45612-201ENSMUST00000211320 160 ntBASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rsph6aQ8CDR2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Gm20553-201ENSMUST00000204205 844 ntBASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rsph6aQ8CDR2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Rsph6aQ8CDR2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Gm6226-201ENSMUST00000117765 1146 ntBASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Gm16198-201ENSMUST00000118766 670 ntBASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 AC155252.2-201ENSMUST00000226946 680 ntBASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rsph6aQ8CDR2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rsph6aQ8CDR2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms