Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm8825-201ENSMUST00000182565 998 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm4518-201ENSMUST00000182638 718 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc38Q8CDN8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 BC037039-201ENSMUST00000192003 2205 ntBASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc38Q8CDN8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc38Q8CDN8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc38Q8CDN8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms