Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Rprl3-201ENSMUST00000157400 290 ntBASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Aph1bQ8C7N7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Gm9172-201ENSMUST00000212092 954 ntBASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Grk6-207ENSMUST00000225925 2769 ntBASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Aph1bQ8C7N7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Aph1bQ8C7N7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Efs-202ENSMUST00000227037 2540 ntBASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Aph1bQ8C7N7 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms