Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a6Q8C6K9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm38294-201ENSMUST00000192831 381 ntBASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm7730-201ENSMUST00000212486 454 ntBASIC14□□□□□ -0.17
Col6a6Q8C6K9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Col6a6Q8C6K9 Gm22065-201ENSMUST00000103753 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm22066-201ENSMUST00000103761 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24932-201ENSMUST00000103763 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24115-201ENSMUST00000103799 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm22190-201ENSMUST00000103827 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm22191-201ENSMUST00000103831 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24721-201ENSMUST00000103849 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm28018-201ENSMUST00000103869 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm26399-201ENSMUST00000103937 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25349-201ENSMUST00000177728 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm23616-201ENSMUST00000177797 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25871-201ENSMUST00000177816 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24752-201ENSMUST00000178240 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm18057-201ENSMUST00000208220 503 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm7653-201ENSMUST00000214567 508 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a6Q8C6K9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms