Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Usp44Q8C2S0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Gm15173-201ENSMUST00000122049 433 ntBASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.18■□□□□ 0.5
Usp44Q8C2S0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Usp44Q8C2S0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Gm11764-201ENSMUST00000120221 623 ntBASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Gm18489-201ENSMUST00000172565 551 ntBASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.17■□□□□ 0.5
Usp44Q8C2S0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp44Q8C2S0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 AV026068-213ENSMUST00000223675 1171 ntBASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp44Q8C2S0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp44Q8C2S0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Usp44Q8C2S0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp44Q8C2S0 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.14■□□□□ 0.49
Usp44Q8C2S0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms