Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim47Q8C0E3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Gm14140-201ENSMUST00000119999 995 ntBASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Gm9682-201ENSMUST00000197505 556 ntBASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim47Q8C0E3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim47Q8C0E3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim47Q8C0E3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.21■□□□□ 0.34
Trim47Q8C0E3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trim47Q8C0E3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Gm11779-201ENSMUST00000118541 368 ntBASIC17.2■□□□□ 0.34
Trim47Q8C0E3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim47Q8C0E3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm18489-201ENSMUST00000172565 551 ntBASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm5867-201ENSMUST00000063197 592 ntBASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim47Q8C0E3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm27300-201ENSMUST00000184085 97 ntBASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm27335-201ENSMUST00000184758 97 ntBASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.18■□□□□ 0.34
Trim47Q8C0E3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms