Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cpne3Q8BT60 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpne3Q8BT60 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpne3Q8BT60 AA414768-201ENSMUST00000121924 1257 ntBASIC15.06■□□□□ 0
Cpne3Q8BT60 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.06■□□□□ 0
Cpne3Q8BT60 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Mir6404-201ENSMUST00000183699 94 ntBASIC15.06■□□□□ 0
Cpne3Q8BT60 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.06■□□□□ 0
Cpne3Q8BT60 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpne3Q8BT60 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpne3Q8BT60 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpne3Q8BT60 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
Cpne3Q8BT60 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Cpne3Q8BT60 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.05■□□□□ -0
Cpne3Q8BT60 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpne3Q8BT60 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.04■□□□□ -0
Cpne3Q8BT60 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpne3Q8BT60 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Gm6257-201ENSMUST00000163864 910 ntBASIC15.04■□□□□ -0
Cpne3Q8BT60 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.04■□□□□ -0
Cpne3Q8BT60 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpne3Q8BT60 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.03■□□□□ -0
Cpne3Q8BT60 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpne3Q8BT60 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpne3Q8BT60 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms