Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.22■□□□□ 0.83
Col16a1Q8BLX7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Gm6473-201ENSMUST00000188572 1210 ntBASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Col16a1Q8BLX7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Col16a1Q8BLX7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Col16a1Q8BLX7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Gm11543-201ENSMUST00000120758 370 ntBASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Gm18766-201ENSMUST00000189811 808 ntBASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Gm38225-201ENSMUST00000194001 393 ntBASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Col16a1Q8BLX7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm27920-201ENSMUST00000183953 96 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm14767-201ENSMUST00000121559 586 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm16215-201ENSMUST00000161990 637 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm44855-201ENSMUST00000205725 362 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col16a1Q8BLX7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.16■□□□□ 0.82
Col16a1Q8BLX7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms