Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Gm9987-201ENSMUST00000069768 567 ntBASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Chmp2bQ8BJF9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Chmp2bQ8BJF9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp2bQ8BJF9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp2bQ8BJF9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Chmp2bQ8BJF9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gm10013-201ENSMUST00000106074 672 ntBASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Chmp2bQ8BJF9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Chmp2bQ8BJF9 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Gm9013-201ENSMUST00000132939 882 ntBASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.93■□□□□ 0.14
Chmp2bQ8BJF9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms