Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh20Q8BIZ0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh20Q8BIZ0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh20Q8BIZ0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.21■□□□□ 0.02
Pcdh20Q8BIZ0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh20Q8BIZ0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh20Q8BIZ0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.2■□□□□ 0.02
Pcdh20Q8BIZ0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Gm13312-201ENSMUST00000119631 718 ntBASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Rprl3-201ENSMUST00000157400 290 ntBASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Gm27741-201ENSMUST00000185060 237 ntBASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh20Q8BIZ0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh20Q8BIZ0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms