Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rnf38Q8BI21 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Gm6257-201ENSMUST00000163864 910 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Rnf38Q8BI21 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.04■□□□□ -0
Rnf38Q8BI21 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf38Q8BI21 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.03■□□□□ -0
Rnf38Q8BI21 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rnf38Q8BI21 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf38Q8BI21 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rnf38Q8BI21 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf38Q8BI21 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rnf38Q8BI21 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf38Q8BI21 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Efs-202ENSMUST00000227037 2540 ntBASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Gm7367-201ENSMUST00000057611 492 ntBASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf38Q8BI21 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms