Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Gm10355-201ENSMUST00000097146 517 ntBASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.34■□□□□ 0.53
U2af1l4Q8BGJ9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1l4Q8BGJ9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1l4Q8BGJ9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1l4Q8BGJ9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.33■□□□□ 0.53
U2af1l4Q8BGJ9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1l4Q8BGJ9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1l4Q8BGJ9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1l4Q8BGJ9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gm6257-201ENSMUST00000163864 910 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 AV026068-213ENSMUST00000223675 1171 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
U2af1l4Q8BGJ9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gm14057-201ENSMUST00000120631 482 ntBASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gm25406-201ENSMUST00000157599 105 ntBASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Gm25745-201ENSMUST00000174945 133 ntBASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
U2af1l4Q8BGJ9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms