Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trnp1Q80ZI1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trnp1Q80ZI1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Trnp1Q80ZI1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trnp1Q80ZI1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Gm13216-201ENSMUST00000117145 591 ntBASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Gm28630-201ENSMUST00000187806 498 ntBASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trnp1Q80ZI1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Gm14127-201ENSMUST00000117906 678 ntBASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Gm13015-201ENSMUST00000118674 204 ntBASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Gm18049-201ENSMUST00000208909 581 ntBASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trnp1Q80ZI1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Gm14719-201ENSMUST00000121891 340 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Gm9063-201ENSMUST00000223299 582 ntBASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trnp1Q80ZI1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 Gm14767-201ENSMUST00000121559 586 ntBASIC17.42■□□□□ 0.38
Trnp1Q80ZI1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms