Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Gm20949-201ENSMUST00000206478 952 ntBASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Prpf40bQ80W14 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf40bQ80W14 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.9■□□□□ 0.46
Prpf40bQ80W14 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf40bQ80W14 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Prpf40bQ80W14 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Prpf40bQ80W14 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gm11764-201ENSMUST00000120221 623 ntBASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gm5682-201ENSMUST00000173402 505 ntBASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf40bQ80W14 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf40bQ80W14 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms