Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Prpf38bQ80SY5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Gm11780-201ENSMUST00000136880 516 ntBASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Prpf38bQ80SY5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Gm20949-201ENSMUST00000206478 952 ntBASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Prpf38bQ80SY5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Gm17271-201ENSMUST00000165535 355 ntBASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Gm7506-201ENSMUST00000207758 815 ntBASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Prpf38bQ80SY5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms