Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx4Q7TNK1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm16061-201ENSMUST00000122167 857 ntBASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm21814-202ENSMUST00000203277 873 ntBASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx4Q7TNK1 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx4Q7TNK1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfx4Q7TNK1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfx4Q7TNK1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx4Q7TNK1 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfx4Q7TNK1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms