Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Vma21Q78T54 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Vma21Q78T54 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vma21Q78T54 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.69□□□□□ -0.38
Vma21Q78T54 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Gm10013-201ENSMUST00000106074 672 ntBASIC12.69□□□□□ -0.38
Vma21Q78T54 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Gm9987-201ENSMUST00000069768 567 ntBASIC12.69□□□□□ -0.38
Vma21Q78T54 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vma21Q78T54 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Vma21Q78T54 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.68□□□□□ -0.38
Vma21Q78T54 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gm9013-201ENSMUST00000132939 882 ntBASIC12.68□□□□□ -0.38
Vma21Q78T54 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gm6623-201ENSMUST00000173570 544 ntBASIC12.68□□□□□ -0.38
Vma21Q78T54 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vma21Q78T54 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vma21Q78T54 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Gm18032-201ENSMUST00000222541 538 ntBASIC12.67□□□□□ -0.38
Vma21Q78T54 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.67□□□□□ -0.38
Vma21Q78T54 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Vma21Q78T54 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vma21Q78T54 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.67□□□□□ -0.38
Vma21Q78T54 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms