Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm12151-201ENSMUST00000121374 290 ntBASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx55Q6ZPL9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx55Q6ZPL9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx55Q6ZPL9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Gm27306-201ENSMUST00000183970 107 ntBASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx55Q6ZPL9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Gm2810-201ENSMUST00000118681 990 ntBASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx55Q6ZPL9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Gm6415-201ENSMUST00000118488 348 ntBASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Gm5866-201ENSMUST00000177881 973 ntBASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx55Q6ZPL9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Gm38294-201ENSMUST00000192831 381 ntBASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ddx55Q6ZPL9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ddx55Q6ZPL9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms