Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nup98Q6PFD9 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm16026-204ENSMUST00000162652 683 ntBASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm7063-201ENSMUST00000186840 981 ntBASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.16■□□□□ 0.5
Nup98Q6PFD9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.16■□□□□ 0.5
Nup98Q6PFD9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Gm13015-201ENSMUST00000118674 204 ntBASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Gm43767-201ENSMUST00000198933 381 ntBASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Nup98Q6PFD9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Gm10253-201ENSMUST00000194270 940 ntBASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Gm7774-201ENSMUST00000200064 533 ntBASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.14■□□□□ 0.5
Nup98Q6PFD9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Nup98Q6PFD9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Nup98Q6PFD9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms