Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc85bQ6PDY0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc85bQ6PDY0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc85bQ6PDY0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc85bQ6PDY0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc85bQ6PDY0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22065-201ENSMUST00000103753 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22066-201ENSMUST00000103761 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24932-201ENSMUST00000103763 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24115-201ENSMUST00000103799 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22190-201ENSMUST00000103827 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22191-201ENSMUST00000103831 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24721-201ENSMUST00000103849 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm28018-201ENSMUST00000103869 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm26399-201ENSMUST00000103937 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm13223-201ENSMUST00000118609 747 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm18489-201ENSMUST00000172565 551 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc85bQ6PDY0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Gm27618-201ENSMUST00000183671 60 ntBASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Mir8102-201ENSMUST00000184148 139 ntBASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.16■□□□□ 0.18
Ccdc85bQ6PDY0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm43433-201ENSMUST00000196573 481 ntBASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccdc85bQ6PDY0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms