Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Gm12085-201ENSMUST00000119263 940 ntBASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Gm10653-202ENSMUST00000139570 835 ntBASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Efs-202ENSMUST00000227037 2540 ntBASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rnf220Q6PDX6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Mir1199-201ENSMUST00000117015 119 ntBASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rnf220Q6PDX6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Timm23-208ENSMUST00000226683 750 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rnf220Q6PDX6 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rnf220Q6PDX6 Gm18958-201ENSMUST00000174258 762 ntBASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rnf220Q6PDX6 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms