Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 BC037039-201ENSMUST00000192003 2205 ntBASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Gm6376-201ENSMUST00000209407 580 ntBASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarcc2Q6PDG5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44357-201ENSMUST00000195897 142 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm19658-201ENSMUST00000196231 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44367-201ENSMUST00000196836 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44350-201ENSMUST00000197197 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44390-201ENSMUST00000197533 144 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44313-201ENSMUST00000198018 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44486-201ENSMUST00000198508 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44314-201ENSMUST00000199263 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44394-201ENSMUST00000199558 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44484-201ENSMUST00000199873 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44466-201ENSMUST00000200264 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm44359-201ENSMUST00000200671 138 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm6296-201ENSMUST00000222599 943 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarcc2Q6PDG5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Gm4459-201ENSMUST00000118750 468 ntBASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Gm12497-201ENSMUST00000138778 237 ntBASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarcc2Q6PDG5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smarcc2Q6PDG5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smarcc2Q6PDG5 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms