Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Mir6404-201ENSMUST00000183699 94 ntBASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Smarcd3Q6P9Z1 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Gm9987-201ENSMUST00000069768 567 ntBASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcd3Q6P9Z1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcd3Q6P9Z1 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarcd3Q6P9Z1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms