Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abcf1Q6P542 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Abcf1Q6P542 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Abcf1Q6P542 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.45■□□□□ 0.38
Abcf1Q6P542 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abcf1Q6P542 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abcf1Q6P542 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.43■□□□□ 0.38
Abcf1Q6P542 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.43■□□□□ 0.38
Abcf1Q6P542 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.43■□□□□ 0.38
Abcf1Q6P542 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abcf1Q6P542 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abcf1Q6P542 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms