Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Gm7506-201ENSMUST00000207758 815 ntBASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sp140Q6NSQ5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Gm7977-201ENSMUST00000193787 748 ntBASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sp140Q6NSQ5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sp140Q6NSQ5 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Sybu-209ENSMUST00000228639 4113 ntBASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sp140Q6NSQ5 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.78■□□□□ 0.12
Sp140Q6NSQ5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms