Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ctnna3Q65CL1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm11779-201ENSMUST00000118541 368 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44357-201ENSMUST00000195897 142 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm19658-201ENSMUST00000196231 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44367-201ENSMUST00000196836 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44350-201ENSMUST00000197197 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44390-201ENSMUST00000197533 144 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44313-201ENSMUST00000198018 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44486-201ENSMUST00000198508 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44314-201ENSMUST00000199263 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44394-201ENSMUST00000199558 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44484-201ENSMUST00000199873 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44466-201ENSMUST00000200264 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Gm44359-201ENSMUST00000200671 138 ntBASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ctnna3Q65CL1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ctnna3Q65CL1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ctnna3Q65CL1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ctnna3Q65CL1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms