Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC19.65■□□□□ 0.74
Clcn1Q64347 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Clcn1Q64347 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clcn1Q64347 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC19.64■□□□□ 0.74
Clcn1Q64347 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Clcn1Q64347 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.64■□□□□ 0.73
Clcn1Q64347 Gm11745-201ENSMUST00000121669 448 ntBASIC19.64■□□□□ 0.73
Clcn1Q64347 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.64■□□□□ 0.73
Clcn1Q64347 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clcn1Q64347 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Clcn1Q64347 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 Mir1895-201ENSMUST00000122615 79 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 Gm37171-201ENSMUST00000192636 1185 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.63■□□□□ 0.73
Clcn1Q64347 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clcn1Q64347 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clcn1Q64347 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.63■□□□□ 0.73
Clcn1Q64347 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Gm44872-201ENSMUST00000207864 420 ntBASIC19.62■□□□□ 0.73
Clcn1Q64347 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clcn1Q64347 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clcn1Q64347 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.61■□□□□ 0.73
Clcn1Q64347 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clcn1Q64347 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Clcn1Q64347 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.6■□□□□ 0.73
Clcn1Q64347 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clcn1Q64347 Gm9385-201ENSMUST00000117563 472 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms