Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Ss18Q62280 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC11.51□□□□□ -0.57
Ss18Q62280 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC11.51□□□□□ -0.57
Ss18Q62280 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Ss18Q62280 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 App-207ENSMUST00000227737 2827 ntBASIC11.51□□□□□ -0.57
Ss18Q62280 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.51□□□□□ -0.57
Ss18Q62280 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Ss18Q62280 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Ss18Q62280 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Ss18Q62280 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.5□□□□□ -0.57
Ss18Q62280 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Ss18Q62280 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.5□□□□□ -0.57
Ss18Q62280 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Ss18Q62280 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Ss18Q62280 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Ss18Q62280 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Ss18Q62280 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.49□□□□□ -0.57
Ss18Q62280 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.49□□□□□ -0.57
Ss18Q62280 Gm13836-201ENSMUST00000121159 501 ntBASIC11.49□□□□□ -0.57
Ss18Q62280 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ss18Q62280 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms