Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Gm25948-201ENSMUST00000175334 112 ntBASIC20.17■□□□□ 0.82
Ccne1Q61457 Gm43125-201ENSMUST00000201724 730 ntBASIC20.17■□□□□ 0.82
Ccne1Q61457 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccne1Q61457 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ccne1Q61457 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccne1Q61457 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccne1Q61457 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ccne1Q61457 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccne1Q61457 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 CT025555.1-201ENSMUST00000225901 1217 ntBASIC20.16■□□□□ 0.82
Ccne1Q61457 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccne1Q61457 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Ccne1Q61457 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.16■□□□□ 0.82
Ccne1Q61457 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 AC126250.1-201ENSMUST00000228343 1768 ntBASIC20.16■□□□□ 0.82
Ccne1Q61457 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccne1Q61457 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC20.15■□□□□ 0.82
Ccne1Q61457 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccne1Q61457 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.15■□□□□ 0.82
Ccne1Q61457 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccne1Q61457 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccne1Q61457 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccne1Q61457 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccne1Q61457 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Ccne1Q61457 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccne1Q61457 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccne1Q61457 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccne1Q61457 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ccne1Q61457 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccne1Q61457 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ccne1Q61457 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Nudt18-203ENSMUST00000228768 1578 ntBASIC20.14■□□□□ 0.81
Ccne1Q61457 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccne1Q61457 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC20.14■□□□□ 0.81
Ccne1Q61457 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccne1Q61457 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccne1Q61457 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccne1Q61457 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.13■□□□□ 0.81
Ccne1Q61457 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.13■□□□□ 0.81
Ccne1Q61457 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.13■□□□□ 0.81
Ccne1Q61457 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.13■□□□□ 0.81
Ccne1Q61457 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Ccne1Q61457 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccne1Q61457 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccne1Q61457 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms