Protein–RNA interactions for Protein: Q61451

Cd53, Leukocyte surface antigen CD53, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd53Q61451 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cd53Q61451 Olfr129-201ENSMUST00000122318 993 ntBASIC14.36□□□□□ -0.11
Cd53Q61451 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.36□□□□□ -0.11
Cd53Q61451 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.36□□□□□ -0.11
Cd53Q61451 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.36□□□□□ -0.11
Cd53Q61451 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cd53Q61451 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cd53Q61451 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.35□□□□□ -0.11
Cd53Q61451 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Gm37722-201ENSMUST00000193757 208 ntBASIC14.35□□□□□ -0.11
Cd53Q61451 Gm45328-201ENSMUST00000210942 917 ntBASIC14.35□□□□□ -0.11
Cd53Q61451 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.35□□□□□ -0.11
Cd53Q61451 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.35□□□□□ -0.11
Cd53Q61451 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cd53Q61451 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cd53Q61451 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cd53Q61451 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.34□□□□□ -0.11
Cd53Q61451 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cd53Q61451 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cd53Q61451 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.34□□□□□ -0.11
Cd53Q61451 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cd53Q61451 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.33□□□□□ -0.11
Cd53Q61451 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cd53Q61451 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.33□□□□□ -0.12
Cd53Q61451 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd53Q61451 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms