Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn4Q61418 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn4Q61418 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Clcn4Q61418 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.37□□□□□ -0.11
Clcn4Q61418 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Clcn4Q61418 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.37□□□□□ -0.11
Clcn4Q61418 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Clcn4Q61418 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Clcn4Q61418 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.36□□□□□ -0.11
Clcn4Q61418 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.36□□□□□ -0.11
Clcn4Q61418 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.35□□□□□ -0.11
Clcn4Q61418 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.35□□□□□ -0.11
Clcn4Q61418 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Clcn4Q61418 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.34□□□□□ -0.11
Clcn4Q61418 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Clcn4Q61418 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.34□□□□□ -0.11
Clcn4Q61418 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.34□□□□□ -0.11
Clcn4Q61418 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Clcn4Q61418 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.34□□□□□ -0.11
Clcn4Q61418 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms