Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Six4Q61321 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.68■□□□□ 0.1
Six4Q61321 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Mir5131-201ENSMUST00000175426 93 ntBASIC15.68■□□□□ 0.1
Six4Q61321 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.68■□□□□ 0.1
Six4Q61321 Mzt1-203ENSMUST00000227948 952 ntBASIC15.68■□□□□ 0.1
Six4Q61321 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Six4Q61321 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Six4Q61321 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Six4Q61321 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six4Q61321 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.67■□□□□ 0.1
Six4Q61321 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Six4Q61321 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Six4Q61321 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Gm14722-201ENSMUST00000118943 689 ntBASIC15.67■□□□□ 0.1
Six4Q61321 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Six4Q61321 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six4Q61321 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Six4Q61321 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Gm7222-201ENSMUST00000117512 906 ntBASIC15.66■□□□□ 0.1
Six4Q61321 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.66■□□□□ 0.1
Six4Q61321 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.66■□□□□ 0.1
Six4Q61321 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six4Q61321 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.66■□□□□ 0.1
Six4Q61321 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Six4Q61321 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.65■□□□□ 0.1
Six4Q61321 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.65■□□□□ 0.1
Six4Q61321 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.65■□□□□ 0.1
Six4Q61321 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Six4Q61321 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.65■□□□□ 0.1
Six4Q61321 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six4Q61321 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms