Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Gm23984-201ENSMUST00000157139 203 ntBASIC17.22■□□□□ 0.35
Col11a1Q61245 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.22■□□□□ 0.35
Col11a1Q61245 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Col11a1Q61245 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
Col11a1Q61245 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Gm4875-201ENSMUST00000118257 786 ntBASIC17.21■□□□□ 0.35
Col11a1Q61245 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.21■□□□□ 0.35
Col11a1Q61245 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Gm4204-201ENSMUST00000110798 1231 ntBASIC17.21■□□□□ 0.35
Col11a1Q61245 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.21■□□□□ 0.35
Col11a1Q61245 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Col11a1Q61245 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.21■□□□□ 0.34
Col11a1Q61245 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Col11a1Q61245 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Col11a1Q61245 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Gm15163-201ENSMUST00000120749 1302 ntBASIC17.2■□□□□ 0.34
Col11a1Q61245 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC17.2■□□□□ 0.34
Col11a1Q61245 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.2■□□□□ 0.34
Col11a1Q61245 Gm6180-201ENSMUST00000065243 498 ntBASIC17.2■□□□□ 0.34
Col11a1Q61245 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Col11a1Q61245 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Col11a1Q61245 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.2■□□□□ 0.34
Col11a1Q61245 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Col11a1Q61245 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Col11a1Q61245 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Col11a1Q61245 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm6007-201ENSMUST00000208170 823 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Shd-206ENSMUST00000225145 998 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC17.19■□□□□ 0.34
Col11a1Q61245 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Col11a1Q61245 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm29310-201ENSMUST00000185468 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21825-201ENSMUST00000185728 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm29109-201ENSMUST00000185895 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21896-201ENSMUST00000186520 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21873-201ENSMUST00000186728 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21794-201ENSMUST00000187056 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21880-201ENSMUST00000187275 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21826-201ENSMUST00000187451 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21198-201ENSMUST00000188393 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21749-201ENSMUST00000189343 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21901-201ENSMUST00000189568 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm29424-201ENSMUST00000189716 696 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm28599-201ENSMUST00000189838 694 ntBASIC17.19■□□□□ 0.34
Col11a1Q61245 Gm21867-201ENSMUST00000189917 696 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms