Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1Q61191 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.98□□□□□ -0.33
Hcfc1Q61191 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.97□□□□□ -0.33
Hcfc1Q61191 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Gm14719-201ENSMUST00000121891 340 ntBASIC12.97□□□□□ -0.33
Hcfc1Q61191 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hcfc1Q61191 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hcfc1Q61191 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.96□□□□□ -0.33
Hcfc1Q61191 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hcfc1Q61191 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hcfc1Q61191 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.95□□□□□ -0.34
Hcfc1Q61191 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Gm27437-201ENSMUST00000183429 107 ntBASIC12.95□□□□□ -0.34
Hcfc1Q61191 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.95□□□□□ -0.34
Hcfc1Q61191 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hcfc1Q61191 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.94□□□□□ -0.34
Hcfc1Q61191 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hcfc1Q61191 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Hcfc1Q61191 Mir8102-201ENSMUST00000184148 139 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms