Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Irf9Q61179 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Gm23935-201ENSMUST00000102303 57 ntBASIC19.32■□□□□ 0.68
Irf9Q61179 Gm24270-201ENSMUST00000102326 57 ntBASIC19.32■□□□□ 0.68
Irf9Q61179 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Gm24245-201ENSMUST00000157318 57 ntBASIC19.32■□□□□ 0.68
Irf9Q61179 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.32■□□□□ 0.68
Irf9Q61179 Gm44492-201ENSMUST00000197012 141 ntBASIC19.32■□□□□ 0.68
Irf9Q61179 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Irf9Q61179 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Irf9Q61179 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Irf9Q61179 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Irf9Q61179 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Irf9Q61179 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.31■□□□□ 0.68
Irf9Q61179 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.31■□□□□ 0.68
Irf9Q61179 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.31■□□□□ 0.68
Irf9Q61179 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf9Q61179 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Irf9Q61179 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.3■□□□□ 0.68
Irf9Q61179 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.3■□□□□ 0.68
Irf9Q61179 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Gm10499-201ENSMUST00000174094 934 ntBASIC19.3■□□□□ 0.68
Irf9Q61179 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Irf9Q61179 Gm5177-201ENSMUST00000183092 997 ntBASIC19.3■□□□□ 0.68
Irf9Q61179 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Irf9Q61179 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.3■□□□□ 0.68
Irf9Q61179 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf9Q61179 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Irf9Q61179 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.29■□□□□ 0.68
Irf9Q61179 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.29■□□□□ 0.68
Irf9Q61179 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Gm45747-201ENSMUST00000212203 999 ntBASIC19.29■□□□□ 0.68
Irf9Q61179 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf9Q61179 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Irf9Q61179 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.28■□□□□ 0.68
Irf9Q61179 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.28■□□□□ 0.68
Irf9Q61179 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Irf9Q61179 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.28■□□□□ 0.68
Irf9Q61179 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.28■□□□□ 0.68
Irf9Q61179 Gm17271-201ENSMUST00000165535 355 ntBASIC19.28■□□□□ 0.68
Irf9Q61179 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Irf9Q61179 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Irf9Q61179 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.28■□□□□ 0.68
Irf9Q61179 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Irf9Q61179 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Irf9Q61179 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Irf9Q61179 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms