Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ptch1Q61115 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.19■■□□□ 1.14
Ptch1Q61115 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
Ptch1Q61115 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Gm11478-201ENSMUST00000117851 599 ntBASIC22.19■■□□□ 1.14
Ptch1Q61115 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Ighv5-13-201ENSMUST00000193550 290 ntBASIC22.19■■□□□ 1.14
Ptch1Q61115 Gm9899-201ENSMUST00000065519 555 ntBASIC22.19■■□□□ 1.14
Ptch1Q61115 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ptch1Q61115 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ptch1Q61115 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC22.18■■□□□ 1.14
Ptch1Q61115 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC22.18■■□□□ 1.14
Ptch1Q61115 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC22.18■■□□□ 1.14
Ptch1Q61115 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ptch1Q61115 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm5320-201ENSMUST00000207163 1519 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm13216-201ENSMUST00000117145 591 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm37748-201ENSMUST00000194379 1140 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm42612-201ENSMUST00000197986 623 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm43170-201ENSMUST00000199827 612 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm45195-201ENSMUST00000205597 1008 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm18062-201ENSMUST00000208020 547 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm6007-201ENSMUST00000208170 823 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Gm18055-201ENSMUST00000208254 547 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 CT010506.4-201ENSMUST00000225457 351 ntBASIC22.17■■□□□ 1.14
Ptch1Q61115 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Ptch1Q61115 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC22.17■■□□□ 1.14
Ptch1Q61115 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC22.17■■□□□ 1.14
Ptch1Q61115 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ptch1Q61115 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
Ptch1Q61115 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC22.16■■□□□ 1.14
Ptch1Q61115 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Ldb3-207ENSMUST00000227819 1499 ntBASIC22.16■■□□□ 1.14
Ptch1Q61115 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ptch1Q61115 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Gm18018-201ENSMUST00000198273 408 ntBASIC22.15■■□□□ 1.14
Ptch1Q61115 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ptch1Q61115 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ptch1Q61115 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Gm5566-201ENSMUST00000116118 459 ntBASIC22.14■■□□□ 1.14
Ptch1Q61115 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC22.14■■□□□ 1.14
Ptch1Q61115 Gm13829-201ENSMUST00000119600 138 ntBASIC22.14■■□□□ 1.14
Ptch1Q61115 Gm12091-201ENSMUST00000146791 830 ntBASIC22.14■■□□□ 1.14
Ptch1Q61115 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 Gm45668-201ENSMUST00000211271 493 ntBASIC22.14■■□□□ 1.14
Ptch1Q61115 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ptch1Q61115 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms