Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 Gm16198-201ENSMUST00000118766 670 ntBASIC14.13□□□□□ -0.15
Usf1Q61069 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.13□□□□□ -0.15
Usf1Q61069 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.13□□□□□ -0.15
Usf1Q61069 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.13□□□□□ -0.15
Usf1Q61069 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.13□□□□□ -0.15
Usf1Q61069 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Usf1Q61069 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usf1Q61069 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Usf1Q61069 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usf1Q61069 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.12□□□□□ -0.15
Usf1Q61069 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf1Q61069 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf1Q61069 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf1Q61069 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Usf1Q61069 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.12□□□□□ -0.15
Usf1Q61069 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.12□□□□□ -0.15
Usf1Q61069 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.12□□□□□ -0.15
Usf1Q61069 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usf1Q61069 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Usf1Q61069 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.12□□□□□ -0.15
Usf1Q61069 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usf1Q61069 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usf1Q61069 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm11424-201ENSMUST00000121929 829 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm27437-201ENSMUST00000183429 107 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Usf1Q61069 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Usf1Q61069 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.11□□□□□ -0.15
Usf1Q61069 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Usf1Q61069 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Usf1Q61069 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Usf1Q61069 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usf1Q61069 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms