Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.31□□□□□ -0.12
Foxd3Q61060 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.31□□□□□ -0.12
Foxd3Q61060 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.31□□□□□ -0.12
Foxd3Q61060 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxd3Q61060 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.3□□□□□ -0.12
Foxd3Q61060 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Gm27357-201ENSMUST00000183754 135 ntBASIC14.3□□□□□ -0.12
Foxd3Q61060 Gm5186-201ENSMUST00000218781 920 ntBASIC14.3□□□□□ -0.12
Foxd3Q61060 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Foxd3Q61060 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Foxd3Q61060 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Foxd3Q61060 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Foxd3Q61060 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 AW822252-206ENSMUST00000208904 237 ntBASIC14.29□□□□□ -0.12
Foxd3Q61060 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Foxd3Q61060 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.29□□□□□ -0.12
Foxd3Q61060 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
Foxd3Q61060 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxd3Q61060 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.28□□□□□ -0.12
Foxd3Q61060 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxd3Q61060 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxd3Q61060 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxd3Q61060 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd3Q61060 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms