Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.22■□□□□ 0.03
Col12a1Q60847 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Col12a1Q60847 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.22■□□□□ 0.03
Col12a1Q60847 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.22■□□□□ 0.03
Col12a1Q60847 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Col12a1Q60847 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Col12a1Q60847 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.21■□□□□ 0.03
Col12a1Q60847 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Col12a1Q60847 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.21■□□□□ 0.03
Col12a1Q60847 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Col12a1Q60847 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Col12a1Q60847 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.21■□□□□ 0.02
Col12a1Q60847 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Col12a1Q60847 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.2■□□□□ 0.02
Col12a1Q60847 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Col12a1Q60847 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Col12a1Q60847 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.2■□□□□ 0.02
Col12a1Q60847 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Col12a1Q60847 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Col12a1Q60847 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.19■□□□□ 0.02
Col12a1Q60847 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.19■□□□□ 0.02
Col12a1Q60847 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.19■□□□□ 0.02
Col12a1Q60847 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col12a1Q60847 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.19■□□□□ 0.02
Col12a1Q60847 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Col12a1Q60847 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Col12a1Q60847 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Col12a1Q60847 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms