Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.93□□□□□ -0.02
ClpbQ60649 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Gm11452-201ENSMUST00000122376 690 ntBASIC14.93□□□□□ -0.02
ClpbQ60649 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.93□□□□□ -0.02
ClpbQ60649 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
ClpbQ60649 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ClpbQ60649 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.93□□□□□ -0.02
ClpbQ60649 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.92□□□□□ -0.02
ClpbQ60649 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.92□□□□□ -0.02
ClpbQ60649 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
ClpbQ60649 Gm9172-201ENSMUST00000212092 954 ntBASIC14.92□□□□□ -0.02
ClpbQ60649 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ClpbQ60649 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ClpbQ60649 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.92□□□□□ -0.02
ClpbQ60649 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ClpbQ60649 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ClpbQ60649 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.91□□□□□ -0.02
ClpbQ60649 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.91□□□□□ -0.02
ClpbQ60649 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.91□□□□□ -0.02
ClpbQ60649 Gm18195-201ENSMUST00000207604 706 ntBASIC14.91□□□□□ -0.02
ClpbQ60649 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.91□□□□□ -0.02
ClpbQ60649 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ClpbQ60649 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.91□□□□□ -0.02
ClpbQ60649 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
ClpbQ60649 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.9□□□□□ -0.02
ClpbQ60649 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.9□□□□□ -0.02
ClpbQ60649 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.9□□□□□ -0.02
ClpbQ60649 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
ClpbQ60649 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.9□□□□□ -0.02
ClpbQ60649 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
ClpbQ60649 Gm12497-201ENSMUST00000138778 237 ntBASIC14.9□□□□□ -0.02
ClpbQ60649 Gm25406-201ENSMUST00000157599 105 ntBASIC14.9□□□□□ -0.02
ClpbQ60649 Mir6404-201ENSMUST00000183699 94 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms