Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc85aQ5SP85 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Gm16198-201ENSMUST00000118766 670 ntBASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Gm5779-201ENSMUST00000218467 910 ntBASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc85aQ5SP85 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc85aQ5SP85 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Rarb-207ENSMUST00000225921 2756 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22065-201ENSMUST00000103753 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22066-201ENSMUST00000103761 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24932-201ENSMUST00000103763 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24115-201ENSMUST00000103799 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22190-201ENSMUST00000103827 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22191-201ENSMUST00000103831 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24721-201ENSMUST00000103849 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm28018-201ENSMUST00000103869 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm26399-201ENSMUST00000103937 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25349-201ENSMUST00000177728 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm23616-201ENSMUST00000177797 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25871-201ENSMUST00000177816 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm5866-201ENSMUST00000177881 973 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24752-201ENSMUST00000178240 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24496-201ENSMUST00000178287 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25649-201ENSMUST00000178476 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25548-201ENSMUST00000178681 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm23147-201ENSMUST00000178841 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm26095-201ENSMUST00000179270 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22171-201ENSMUST00000179283 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm23936-201ENSMUST00000179354 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm22619-201ENSMUST00000179516 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25255-201ENSMUST00000179579 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24755-201ENSMUST00000179691 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm26506-201ENSMUST00000179692 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm25086-201ENSMUST00000179931 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm23243-201ENSMUST00000180047 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24659-201ENSMUST00000180212 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm24169-201ENSMUST00000180244 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm23689-201ENSMUST00000180354 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm27359-201ENSMUST00000184153 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm27785-201ENSMUST00000184268 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm27466-201ENSMUST00000184396 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gm27703-201ENSMUST00000184836 110 ntBASIC17.11■□□□□ 0.33
Ccdc85aQ5SP85 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms