Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Rprl3-201ENSMUST00000157400 290 ntBASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Gm9172-201ENSMUST00000212092 954 ntBASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-3Q5R1E6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm8825-201ENSMUST00000182565 998 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm4518-201ENSMUST00000182638 718 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-3Q5R1E6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Gm14722-201ENSMUST00000118943 689 ntBASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6-3Q5R1E6 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms